TAP MADS in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SRF-TF
K-box

(Domain names are clickable)



List of proteins (34)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0016s0005.1.ppacid=28899565 transcript=Cagra.0016s0005.1 locus=Cagra.0016s0005 ID=Cagra.0016s0005.1.v1.1 annot-version=v1.1
Cagra.0114s0045.1.ppacid=28915800 transcript=Cagra.0114s0045.1 locus=Cagra.0114s0045 ID=Cagra.0114s0045.1.v1.1 annot-version=v1.1
Cagra.0133s0015.1.ppacid=28899427 transcript=Cagra.0133s0015.1 locus=Cagra.0133s0015 ID=Cagra.0133s0015.1.v1.1 annot-version=v1.1
Cagra.0179s0008.1.ppacid=28909738 transcript=Cagra.0179s0008.1 locus=Cagra.0179s0008 ID=Cagra.0179s0008.1.v1.1 annot-version=v1.1
Cagra.0753s0004.1.ppacid=28902536 transcript=Cagra.0753s0004.1 locus=Cagra.0753s0004 ID=Cagra.0753s0004.1.v1.1 annot-version=v1.1
Cagra.0824s0100.1.ppacid=28900015 transcript=Cagra.0824s0100.1 locus=Cagra.0824s0100 ID=Cagra.0824s0100.1.v1.1 annot-version=v1.1
Cagra.0887s0001.1.ppacid=28903280 transcript=Cagra.0887s0001.1 locus=Cagra.0887s0001 ID=Cagra.0887s0001.1.v1.1 annot-version=v1.1
Cagra.0891s0086.1.ppacid=28912912 transcript=Cagra.0891s0086.1 locus=Cagra.0891s0086 ID=Cagra.0891s0086.1.v1.1 annot-version=v1.1
Cagra.0917s0080.1.ppacid=28909347 transcript=Cagra.0917s0080.1 locus=Cagra.0917s0080 ID=Cagra.0917s0080.1.v1.1 annot-version=v1.1
Cagra.1004s0007.1.ppacid=28896533 transcript=Cagra.1004s0007.1 locus=Cagra.1004s0007 ID=Cagra.1004s0007.1.v1.1 annot-version=v1.1
Cagra.1013s0063.1.ppacid=28916233 transcript=Cagra.1013s0063.1 locus=Cagra.1013s0063 ID=Cagra.1013s0063.1.v1.1 annot-version=v1.1
Cagra.12068s0001.1.ppacid=28917624 transcript=Cagra.12068s0001.1 locus=Cagra.12068s0001 ID=Cagra.12068s0001.1.v1.1 annot-version=v1.1
Cagra.1216s0008.1.ppacid=28916753 transcript=Cagra.1216s0008.1 locus=Cagra.1216s0008 ID=Cagra.1216s0008.1.v1.1 annot-version=v1.1
Cagra.12398s0004.1.ppacid=28909381 transcript=Cagra.12398s0004.1 locus=Cagra.12398s0004 ID=Cagra.12398s0004.1.v1.1 annot-version=v1.1
Cagra.1508s0040.1.ppacid=28905727 transcript=Cagra.1508s0040.1 locus=Cagra.1508s0040 ID=Cagra.1508s0040.1.v1.1 annot-version=v1.1
Cagra.1681s0033.1.ppacid=28905289 transcript=Cagra.1681s0033.1 locus=Cagra.1681s0033 ID=Cagra.1681s0033.1.v1.1 annot-version=v1.1
Cagra.1695s0023.1.ppacid=28908485 transcript=Cagra.1695s0023.1 locus=Cagra.1695s0023 ID=Cagra.1695s0023.1.v1.1 annot-version=v1.1
Cagra.1718s0014.1.ppacid=28896645 transcript=Cagra.1718s0014.1 locus=Cagra.1718s0014 ID=Cagra.1718s0014.1.v1.1 annot-version=v1.1
Cagra.1772s0002.1.ppacid=28906922 transcript=Cagra.1772s0002.1 locus=Cagra.1772s0002 ID=Cagra.1772s0002.1.v1.1 annot-version=v1.1
Cagra.1772s0003.1.ppacid=28906920 transcript=Cagra.1772s0003.1 locus=Cagra.1772s0003 ID=Cagra.1772s0003.1.v1.1 annot-version=v1.1
Cagra.1777s0039.1.ppacid=28910358 transcript=Cagra.1777s0039.1 locus=Cagra.1777s0039 ID=Cagra.1777s0039.1.v1.1 annot-version=v1.1
Cagra.18025s0001.1.ppacid=28897885 transcript=Cagra.18025s0001.1 locus=Cagra.18025s0001 ID=Cagra.18025s0001.1.v1.1 annot-version=v1.1
Cagra.1968s0094.1.ppacid=28910070 transcript=Cagra.1968s0094.1 locus=Cagra.1968s0094 ID=Cagra.1968s0094.1.v1.1 annot-version=v1.1
Cagra.2356s0007.1.ppacid=28893856 transcript=Cagra.2356s0007.1 locus=Cagra.2356s0007 ID=Cagra.2356s0007.1.v1.1 annot-version=v1.1
Cagra.2519s0016.1.ppacid=28903982 transcript=Cagra.2519s0016.1 locus=Cagra.2519s0016 ID=Cagra.2519s0016.1.v1.1 annot-version=v1.1
Cagra.29077s0001.1.ppacid=28902490 transcript=Cagra.29077s0001.1 locus=Cagra.29077s0001 ID=Cagra.29077s0001.1.v1.1 annot-version=v1.1
Cagra.4031s0057.1.ppacid=28904321 transcript=Cagra.4031s0057.1 locus=Cagra.4031s0057 ID=Cagra.4031s0057.1.v1.1 annot-version=v1.1
Cagra.4044s0006.1.ppacid=28905193 transcript=Cagra.4044s0006.1 locus=Cagra.4044s0006 ID=Cagra.4044s0006.1.v1.1 annot-version=v1.1
Cagra.4153s0004.1.ppacid=28908555 transcript=Cagra.4153s0004.1 locus=Cagra.4153s0004 ID=Cagra.4153s0004.1.v1.1 annot-version=v1.1
Cagra.5017s0002.1.ppacid=28901901 transcript=Cagra.5017s0002.1 locus=Cagra.5017s0002 ID=Cagra.5017s0002.1.v1.1 annot-version=v1.1
Cagra.5647s0017.1.ppacid=28905067 transcript=Cagra.5647s0017.1 locus=Cagra.5647s0017 ID=Cagra.5647s0017.1.v1.1 annot-version=v1.1
Cagra.6165s0001.1.ppacid=28898096 transcript=Cagra.6165s0001.1 locus=Cagra.6165s0001 ID=Cagra.6165s0001.1.v1.1 annot-version=v1.1
Cagra.6942s0024.1.ppacid=28901216 transcript=Cagra.6942s0024.1 locus=Cagra.6942s0024 ID=Cagra.6942s0024.1.v1.1 annot-version=v1.1
Cagra.7352s0007.1.ppacid=28911119 transcript=Cagra.7352s0007.1 locus=Cagra.7352s0007 ID=Cagra.7352s0007.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum